Publications
Int. J. Mol. Sci. 2022, 23(21), 13196: “One Step before Synthesis: Structure–Property–Condition Relationship Models to Sustainable Design of Efficient TiO2-Based Multicomponent Nanomaterials”
30 /10/ 2022
AUTHORS:
Alicja Mikolajczyk and Dawid Falkowski
Nanotoxicology 2022, VOL. 16, NO. 3, 276–289: “NanoMixHamster: a web-based tool for predicting cytotoxicity of TiO2-based multicomponent nanomaterials toward Chinese hamster ovary (CHO-K1) cells”
17 /06/ 2022
AUTHORS: Filip Stoliński, Anna Rybińska-Fryca, Maciej Gromelski, Alicja Mikolajczyk and Tomasz Puzyn.
07/04/ 2022
AUTHORS: Marta Swirog, Alicja Mikołajczyk, Karolina Jagiello, Jaak Jänes, Kaido Tämm, Tomasz Puzyn
Environmental Toxicology and Chemistry: “Meta-analysis of Bioaccumulation Data for Nondissolvable Engineered Nanomaterials in Freshwater Aquatic Organisms”
21/02/ 2022
AUTHORS: Zheng, Y.; Nowack, B.
Science Direct: “Effects of natural organic matter on the joint toxicity and accumulation of Cu nanoparticles and ZnO nanoparticles in Daphnia magna”
01/2022
AUTHORS: Qi Yu, Zhuang Wang, Guiyin Wang, Willie J. G. M. Peijnenburg, Martina G. Vijver
Nanomaterials 2021: “A Multi-Scale Modelling of Aggregation of TiO2 Nanoparticle Suspensions in Water”
15/12/ 2021
AUTHORS: Giulia Mancardi, Matteo Alberghini, Neus Aguilera-Porta, Monica Calatayud, Pietro Asinari, Eliodoro Chiavazzo
01/10/2021
AUTHORS: Vera L. Maria, David Licha, Janeck J. Scott-Fordsmand, Christian G. Huber, and Mónica J. B. Amorim
10/2021
AUTHORS: Susana I.L. Gomes, Janeck J. Scott-Fordsmand and Monica J.B. Amorim
labAnimal: “Annelid genomes: Enchytraeus crypticus, a soil model for the innate (and primed) immune system”
06/09/2021
AUTHORS: Mónica J.B. Amorim, Yannick Gansemans, Susana I.L. Gomes, Filip Van Nieuwerburgh and Janeck J. Scott-Fordsmand
Science Direct: “Probing nano-QSAR to assess the interactions between carbon nanoparticles and a SARS-CoV-2 RNA fragment“
08/2021
AUTHORS: Fan Zhang, Zhuang Wang, Martina G. Vijver, Willie J.G.M. Peijnenburg
National Library of Medicine: “Computer Simulations of the Dissociation Mechanism of Gleevec from Abl Kinase with Milestoning”
10/06/2021
AUTHORS: Narayan B, Buchete NV, Elber R.
Environmental Science & Technology: “Size-Specific, Dynamic, Probabilistic Material Flow Analysis of Titanium Dioxide Releases into the Environment”
4/02/ 2021
AUTHORS: Yuanfang Zheng, Bernd Nowack
Editorial: Nanomaterials | Special Issue “From Nanoinformatics to Nanomaterials Risk Assessment and Governance”
07/01/2021
AUTHORS: Iseult Lynch, Antreas Afantitis, Dario Greco, Maria Dusinska, Miguel A.Banares, Georgia Melagraki
Nanoscale Adv. 2021: “The role of size and nature in nanoparticle binding to a model lung membrane: an atomistic study”
2021
AUTHORS: Singhal A, Agur Sevink GJ
J Phys Chem B: “Replica Exchange Molecular Dynamics of Diphenylalanine Amyloid Peptides in Electric Fields”
2021
AUTHORS: Narayan B, Herbert C, Rodriguez BJ, Brooks BR, Buchete NV.
Nanoimpact Journal: “Zeta potentials (ζ) of metal oxide nanoparticles: A meta-analysis of experimental data and a predictive neural networks modeling.”
2021
AUTHORS: Alicja Mikołajczyk, NataliaSizochenko, Michael Syzochenko, Tomasz Puzyn, Jerzy Leszczynski
2021
AUTHORS: Rita C. Bicho, Augusto M.R. Faustino, Fátima Carvalho, Amadeu M.V.M. Soares, Janeck J. Scott-Fordsmand, Mónica J.B. Amorim
BMC Bioinformatics: “multiGSEA: A GSEA-based pathway enrichment analysis for multi-omics data”
07/12/ 2020
AUTHORS: Sebastian Canzler, Jörg Hackermüller
Science Direct: “Developing an epigenetics model species – from blastula to mature adult, life cycle methylation profile of Enchytraeus crypticus (Oligochaete)”
25/08/2020
AUTHORS: Rita C. Bicho, Janeck J. Scott-Fordsmand, Mónica J.B. Amorim
Nano Micro Small: “Nanocharacterization, Materials Modeling, and Research Integrity as Enablers of Sound Risk Assessment: Designing Responsible Nanotechnology”
12/07/2020
AUTHORS: Ioannis Xiarchos, Athanasios K. Morozinis, Panagiotis Kavouras, Costas A. Charitidis
National Library of Medicine: “The transition between active and inactive conformations of Abl kinase studied by rock climbing and Milestoning. Biochim Biophys Acta”
01/04/ 2020
AUTHORS: Narayan B, Fathizadeh A, Templeton C, He P, Arasteh S, Elber R., Gen Subj.
Journal of Colloid and interface Science: “How thermal stability of ionic liquids leads to more efficient TiO2-based nanophotocatalysts: theoretical and experimental studies”
Elsevier, 25 March 2020
AUTHORS: Anna Rybińska-Fryca, Alicja Mikołajczyk, Justyna Łuczak, Marta Paszkiewicz-Gawron, manika Paszkiewicz, Adriana Zaleska-Medynska, Tomasz Puzyn
Bioinformatics: “BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data”
17/01/ 2020
AUTHORS: Angela Serra, Laura Aliisa Saarimäki, Michele Fratello, Veer Singh Marwah, Dario Greco
Prog Mol Biol Transl Sci.2: “Long-time methods for molecular dynamics simulations: Markov State Models and Milestoning”
1/01/ 2020
AUTHORS: Narayan B, Yuan Y, Fathizadeh A, Elber R, Buchete NV.
Environment International: “Epigenetic effects of (nano)materials in environmental species – Cu case study in Enchytraeus crypticus”
Volume 136 (2020) 105447, Elsevier, January 2020
AUTHORS: Rita C. Bicho, Dick Roelofs, Janine Mariën, Janeck J. Scott-Fordsmand, Mónica J.B. Amorim
Environment Science Nano: “The effect of Ag, Au, Pt, and Pd on the surface properties, photocatalytic activity and toxicity of multicomponent TiO2-based nanomaterials”
01/2020
AUTHORS: Malankowska A, Mikołajczyk A, Mȩdrzycka J, Wysocka I, Nowaczyk G, Jarek M, et al.
Environmental Science: Nano, 1661–1669 | “Multivariate Analysis of the Exposure and Hazard of Ceria Nanomaterials in Indoor Aquatic Mesocosms.”
2020
AUTHORS: Nassar, M., Auffan, M., Santaella, C., Masion, A., and Rose, J.
Nanoscale, England, 23 May 2019
AUTHORS: Mikolajczyk A., Sizochenko N., Mulkiewicz, E., Malankowska A., Rasulev B., Puzyn T.
Harvard University (USA), 5-6 March 2019
AUTHOR: Miguel Bañares
Regulatory Toxicology and Pharmacology: “Pulmonary toxicity of silver vapours, nanoparticles and fine dusts: A review”
AUTHORS: Niels Hadrup, Anoop K. Sharma , Katrin Loeschner , and Nicklas R. Jacobsen
Nanomaterials: “Transcriptomics in Toxicogenomics, Part I: Experimental Design, Technologies, Publicly Available Data, Regulatory Aspects”
AUTHORS: Pia Anneli Sofia Kinaret, Angela Serra, Antonio Federico, Pekka Kohonen, Penny Nymark, Irene Liampa, My Kieu Ha , Jang-Sik Choi, Karolina Jagiello, Natasha Sanabri, Georgia Melagraki, Luca Cattelani, Michele Fratello, Haralambos Sarimveis6, Antreas Afantitis , Tae-Hyun Yoon, Mary Gulumian, Roland Grafström, Tomasz Puzyn, Dario Greco
Materials: “Your spreadsheets can be FAIR: a tool and FAIRification workflow for eNanoMapper database”
AUTHORS: Nikolay Kochev, Nina Jeliazkova, Vesselina Paskaleva, Gergana Tancheva, Luchesar Iliev, Peter Ritchie, Vedrin Jeliazkov.
Nanomaterials: “Multigenerational exposure to WCCo nanomaterials – epigenetics in the soil invertebrate Enchytraeus crypticus”
AUTHORS: Rita C. Bicho, Janeck J. Scott-Fordsmand, Mónica J.B. Amorim.
Environmental Science: Nano | “Nano-QSAR modeling for ecosafe design of heterogeneous TiO2-based nano-photocatalysts”
07/04/2018
AUTHORS: Alicja Mikolajczyk, Agnieszka Gajewicz, Ewa Mulkiewicz, Bakhtiyor Rasulev, Martyna Marchelek, Magdalena Diak, Seishiro Hirano, Adriana Zaleska-Medynska and Tomasz Puzyn